Bioinformatics/Data Scientist
Conduct multi-omics analyses (scRNA-seq, bulk RNA-seq, proteomics, metabolomics) on organoid systems to characterize fidelity and identify biomarkers. Develop computational pipelines, integrate public datasets, and collaborate with experimental teams. Requires a PhD in bioinformatics or related field with strong R/Python skills.
About the job
Responsibilities
- Analyze complex datasets including single-cell RNA sequencing, bulk RNA sequencing, proteomics, and metabolomics data from various organoid systems and their tissue counterparts.
- Develop and implement computational pipelines for data processing, quality control, and statistical analysis.
- Integrate SOM-generated data with publicly available datasets to benchmark organoid characteristics against normal tissue profiles.
- Collaborate with experimental teams to interpret results and guide protocol optimization.
- Contribute to manuscript preparation and present findings at scientific conferences.
Requirements
- PhD in bioinformatics, computational biology, biostatistics, or a related quantitative field.
- Extensive experience with single-cell data analysis, including familiarity with tools such as Seurat, Scanpy, or similar platforms.
- Strong programming skills in R and Python.
- Experience in statistical analysis and data visualization.
- Knowledge of proteomics and metabolomics data analysis workflows.
Nice-to-Haves
- Previous experience analyzing organoid datasets.
- Experience with machine learning approaches for biological data.
- Familiarity with pathway analysis tools.
- Knowledge of developmental biology principles.
- Experience with high-performance computing environments and version control systems.
Skills
R, Python, Seurat, Scanpy, Single-Cell Rna Sequencing, Bulk Rna Sequencing, Proteomics Data Analysis, Metabolomics Data Analysis, Statistical Analysis, Data Visualization, Machine Learning, High-Performance Computing
Similar jobs
Data Science jobs
Notion
San Francisco, CA
Analyzes product and business data, develops metrics and dashboards, and communicates actionable recommendations to cross-functional teams and leadership. Candidates should be pursuing a quantitative bachelor's or master's degree, with SQL proficiency and familiarity with Python or R.
Socure
San Francisco, CAData Scientist II developing graph-based algorithms, entity-resolution models, and large-scale data pipelines for identity and deceased-monitoring products. Requires advanced academic training or equivalent experience, strong Python/Scala and SQL skills, and hands-on Spark and AWS experience.
Forge
San Francisco, CA
Analyzes proprietary private-market transaction and pricing data to identify valuation, liquidity, and investor trends, then translates findings into research publications and investor-facing thought leadership. Requires a bachelor's degree, strong quantitative skills, Excel and Python proficiency, and 3–7 years of relevant experience.
Layer Health
Boston, MAThe Forward Deploy Data Scientist will partner with health systems and internal teams to investigate healthcare data, build and operationalize ML/LLM pipelines, and deliver actionable insights. The role requires 2–3 years of data science experience, strong Python and ML/NLP skills, and customer-facing communication ability.
Coinbase
San Francisco, CA
Data Science Intern supporting product and engineering teams through statistical analysis, experimentation, analytical modeling, and data-driven recommendations. The role requires quantitative academic study or equivalent project experience, plus familiarity with Python and SQL.