# Bioinformatics/Data Scientist

**Company:** [Axle](https://hotfix.jobs/companies/axle)
**Location:** Frederick, MD
**Role:** Data Science
**Salary:** $105k – $120k/yr
**Experience:** 0+ years
**Skills:** R, Python, Seurat, Scanpy, Single-Cell Rna Sequencing, Bulk Rna Sequencing, Proteomics Data Analysis, Metabolomics Data Analysis, Statistical Analysis, Data Visualization, Machine Learning, High-Performance Computing
**Posted:** 2026-05-21

> Conduct multi-omics analyses (scRNA-seq, bulk RNA-seq, proteomics, metabolomics) on organoid systems to characterize fidelity and identify biomarkers. Develop computational pipelines, integrate public datasets, and collaborate with experimental teams. Requires a PhD in bioinformatics or related field with strong R/Python skills.

## Job Description

## Responsibilities
- Analyze complex datasets including single-cell RNA sequencing, bulk RNA sequencing, proteomics, and metabolomics data from various organoid systems and their tissue counterparts.
- Develop and implement computational pipelines for data processing, quality control, and statistical analysis.
- Integrate SOM-generated data with publicly available datasets to benchmark organoid characteristics against normal tissue profiles.
- Collaborate with experimental teams to interpret results and guide protocol optimization.
- Contribute to manuscript preparation and present findings at scientific conferences.

## Requirements
- PhD in bioinformatics, computational biology, biostatistics, or a related quantitative field.
- Extensive experience with single-cell data analysis, including familiarity with tools such as Seurat, Scanpy, or similar platforms.
- Strong programming skills in R and Python.
- Experience in statistical analysis and data visualization.
- Knowledge of proteomics and metabolomics data analysis workflows.

## Nice-to-Haves
- Previous experience analyzing organoid datasets.
- Experience with machine learning approaches for biological data.
- Familiarity with pathway analysis tools.
- Knowledge of developmental biology principles.
- Experience with high-performance computing environments and version control systems.

## Similar roles

- [Data Scientist II, Infrastructure](https://hotfix.jobs/jobs/5decf476-0c1b-4fea-b4da-9ac641ab4dd8) - Pinterest - Remote - $114k – $235k/yr
- [Data Scientist II, Experimentation](https://hotfix.jobs/jobs/0b197bd5-2751-400f-99d7-6483390153c5) - Pinterest - Remote - $114k – $235k/yr
- [Data Scientist - TrainingPeaks](https://hotfix.jobs/jobs/a97327b1-96cc-43a8-a0bf-a6069804f196) - Peaksware - Louisville, CO - $95k – $158k/yr
- [Data Scientist, AI Solutions](https://hotfix.jobs/jobs/98844320-f001-41c5-90ba-5afbe4d59c8f) - DataVisor - Mountain View, CA - $120k – $170k/yr
- [Data Scientist, New Grad - Model Optimization](https://hotfix.jobs/jobs/1eeb48a2-d520-4d1f-b7c8-ab9cf6f7a39f) - Quadric - Burlingame, CA - $120k – $160k/yr

**Apply:** https://hotfix.jobs/jobs/5734fe32-540b-4a62-a4b0-bb736f8b9a3a
**Canonical:** https://hotfix.jobs/jobs/5734fe32-540b-4a62-a4b0-bb736f8b9a3a